Suryadipto Sarkar - Biomedical Network Science Lab

Suryadipto Sarkar, MSc

PhD Candidate

Department Artififical Intelligence in Biomedical Engineering (AIBE)
Biomedical Network Science Lab

Room 01.035
Werner-von-Siemens-Str. 61
91052 Erlangen

Email: suryadipto.sarkar@fau.de
Website: https://www.bionets.tf.fau.de/person/suryadipto-sarkar/

Since September 2021
PhD candidate at the Biomedical Network Science Lab, Department Artificial Intelligence in Biomedical Engineering, Friedrich-Alexander University Erlangen-Nürnberg, Erlangen, Germany.
January 2019 – August 2021
MSc Computer Engineering, Arizona State University, Tempe, USA.
August 2016 – January 2018
Software developer at TEKsystems Global Services, Allegis Group.
January 2016 – May 2016
Trainee at TEKsystems Global Services, Allegis Group.
June 2012 – June 2016
BSc Electronics and Communication Engineering, Manipal Institute of Technology, Manipal, India.

2024

Maier A., Hartung M., Abovsky M., Adamowicz K., Bader GD., Baier S., Blumenthal DB., Chen J., Elkjaer ML., Garcia-Hernandez C., Helmy M., Hoffmann M., Jurisica I., Kotlyar M., Lazareva O., Levi H., List M., Lobentanzer S., Loscalzo J., Malod-Dognin N., Manz Q., Matschinske J., Mee M., Oubounyt M., Pastrello C., Pico AR., Pillich RT., Poschenrieder JM., Pratt D., Pržulj N., Sadegh S., Saez-Rodriguez J., Sarkar S., Shaked G., Shamir R., Trummer N., Turhan U., Wang RS., Zolotareva O., Baumbach J.:
Drugst.One - a plug-and-play solution for online systems medicine and network-based drug repurposing
In: Nucleic Acids Research 52 (2024), p. W481-W488
ISSN: 0305-1048
DOI: 10.1093/nar/gkae388
BibTeX: Download
Sarkar S., Möller A., Hartebrodt A., Erdmann M., Ostalecki C., Baur A., Blumenthal DB.:
Spatial cell graph analysis reveals skin tissue organization characteristic for cutaneous T cell lymphoma
In: npj Systems Biology and Applications 10 (2024), Article No.: 143
ISSN: 2056-7189
DOI: 10.1038/s41540-024-00474-x
BibTeX: Download
Sarkar S., Wu T., Harwood M., Silva AC.:
A Transfer Learning-Based Framework for Classifying Lymph Node Metastasis in Prostate Cancer Patients
In: Biomedicines 12 (2024), Article No.: 2345
ISSN: 2227-9059
DOI: 10.3390/biomedicines12102345
BibTeX: Download

2023

Sarkar S., Lucchetta M., Maier A., Abdrabbou MMM., Baumbach J., List M., Schaefer MH., Blumenthal DB.:
Online bias-aware disease module mining with ROBUST-Web
In: Bioinformatics 35 (2023), Article No.: btad345
ISSN: 1367-4803
DOI: 10.1093/bioinformatics/btad345
BibTeX: Download
Sarkar S., Min K., Ikram W., Tatton RW., Riaz IB., Silva AC., Bryce AH., Moore C., Ho TH., Sonpavde G., Abdul-Muhsin HM., Singh P., Wu T.:
Performing Automatic Identification and Staging of Urothelial Carcinoma in Bladder Cancer Patients Using a Hybrid Deep-Machine Learning Approach
In: Cancers 15 (2023), Article No.: 1673
ISSN: 2072-6694
DOI: 10.3390/cancers15061673
BibTeX: Download